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Joint Berkeley Initiative for Microbiome Science

Joint Berkeley Initiative for Microbiome Science

  • About
    • Leadership
    • Scientific Advisory Board
    • Partners
    • News
  • Community
    • People
    • Spotlights
  • Education
    • Graduate Courses
    • Undergraduate Courses
    • Seminars and Events
  • Connect
    • Contact
  • Opportunities
    • Current Openings
    • Graduate Opportunities
    • Post-Baccalaureate Opportunities
    • Undergraduate Opportunities

COBRA improves viral MAGs

Drs. LinXing Chen and Jill Banfield (IGI and EPS departments at UC Berkeley) unveiled Contig Overlap Based Re-Assembly (COBRA), a bioinformatic tool that resolves viral MAG assembly breakpoints. They tested the tool using >200 published freshwater metagenomes and found that COBRA vastly improved our ability to generate circular genome assemblies from 34% to 70%.
Published February 6, 2024 in Natural Microbiology.

Created by LinXing Chen.

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